Conference Abstracts

  1. Joshi AA, Choi S, Shattuck DW, Leahy RM (2016) SVReg: Surface-Constrained Volumetric Registration in BrainSuite 22nd Annual Meeting of the Organization for Human Brain Mapping Geneva, Switzerland, June 2016.
  2. Philips OR, Joshi SH, Narr KL, Shattuck DW, Singh M, Ploner C, Pruess H, Paul F, Di Paola M, Finke C (2016) Returning to Normalcy: The Superficial White matter in Anti-NMDA Receptor Encephalitis, 22nd Annual Meeting of the Organization for Human Brain Mapping Geneva, Switzerland, June 2016.
  3. Varadarajan D, Wang ZI, Joshi AA, Shattuck DW, Jones SE, Leahy RM (2015) Detecting Focal Cortical Dysplasia using Population-Based Models of Cortical Thickness, 21st Annual Meeting of the Organization for Human Brain Mapping Honolulu, Hawaii, June 2015.
  4. Chong M, Joshi AA, Haldar JP, DuPre E, Luh W-M, Shattuck DW, Spreng RN, Leahy RM (2015) A Group Approach to Functional Cortical Parcellation from Resting-State fMRI, 21st Annual Meeting of the Organization for Human Brain Mapping Honolulu, Hawaii, June 2015.
  5. Jones S, Wang I, Alexopoulos A, Al-Sharif N, Burgess R, Joshi A, Krishnan B, Leahy R, Mosher J, Udayasankar U, Shattuck D (2015) Automated Quantitative Assessment of Rasmussen's Encephalitis, American Society of Neuroradiology 53rd Annual Meeting, Chicago, IL, April 2015.
  6. Chambers M, Bhushan C, Pirnia T, Narr K, Haldar J, Leahy R, and Shattuck D (2014) Registration-Based Distortion and Intensity Correction in fMRI 20th Annual Meeting of the Organization for Human Brain Mapping Hamburg, Germany, June 2014.
  7. Joshi S, Woods, R, Joshi A, Fears S, Al-Sharif N, Leahy R, and Shattuck D (2014) A Statistical Toolbox for BrainSuite 20th Annual Meeting of the Organization for Human Brain Mapping Hamburg, Germany, June 2014.
  8. Joshi A, Bhushan C, Shattuck D, and Leahy R (2014) Estimation of cortical thickness from T1-weighted MRI images using tissue fractions 20th Annual Meeting of the Organization for Human Brain Mapping Hamburg, Germany, June 2014.
  9. Balasubramaniam E, Joshi A, Shattuck D, and Leahy R (2014) A PDE approach for automatic thickness estimation using partial volume classification ISMRM 22nd Annual Meeting & Exhibition Milan, Italy, April 2014.
  10. Bhushan C, Haldar JP, Joshi AA, Shattuck DW, and Leahy RM (2014) INVERSION: A Robust Method for Co-registration of T1 AND Diffusion Weighted MRI Images ISMRM 22nd Annual Meeting & Exhibition Milan, Italy, April 2014.
  11. Beroukhim D, Konersman M, Chong M, Joshi AA, Bhushan C, Shattuck DW, Haldar JP, Leahy RM, Winstein CJ (2013) Effects of rehabilitation post-stroke: DTI analysis of corticospinal tract characteristics using BrainSuite13, 43rd International Meeting of the Society for Neuroscience San Diego, CA, November 2013.
  12. Shattuck D Joshi A, Haldar J, Bhushan C, Choi S, Krause A, Wisnowski J, Damasio H, Toga A, and Leahy R (2013) New BrainSuite13 Tools for Image Segmentation, Registration Connectivity Analysis and Visualization, 19th Annual Meeting of the Organization for Human Brain Mapping, Seattle, WA, June 2013.
  13. Joshi A, Ashrafulla S, Shattuck D, Damasio H, and Leahy R (2013) Automated Analysis of the Shape of Sulcal Curves using the Anisotropic Helmholtz Equation, 19th Annual Meeting of the Organization for Human Brain Mapping, Seattle, WA, June 2013.
  14. Choi S, Bhushan C, Joshi AA, Raphel K, Tranel D, Shattuck D, Haldar J, Leahy RM, Damasio H, Wisnowski J (2013) Altered orbitofrontal tissue microstructure in patients with chronic anterior temporal lobe lesions, 19th Annual Meeting of the Organization for Human Brain Mapping, Seattle, WA, June 2013.
  15. Shattuck DW Joshi AA, Haldar JP, Bhushon C, Krause AC, Wisnowski JL, Toga AW, Leahy RM (2013) Software Tools for Anatomical ROI-based Connectivity Analysis, ISMRM 21st Annual Meeting & Exhibition, Salt Lake City, Utah, April 2013.
  16. Haldar JP, Shattuck DW Leahy RM (2013, press) Estimation of White Matter Fiber Orientations with the Funk-Radon and Cosine Transform, ISMRM 21st Annual Meeting & Exhibition, Salt Lake City, Utah, April 2013.
  17. Choi S, Joshi AA, Bhushan C, Shattuck DW Leahy RM, Damasio H, Panigrahy A, Wisnowski JL (2013) A Multimodal Investigation of Neuronal/Axonal Integrity Using Structural T1-weighted Imaging, Diffusion Tensor Imaging, and H1 MR Spectroscopy, ISMRM 21st Annual Meeting & Exhibition, Salt Lake City, Utah, April 2013.
  18. Haldar JP, Shattuck DW, Damasio H, Leahy RM (2012) Improved Diffusion Tractography with the Funk-Radon and Cosine Transform, to appear at 18th Annual Meeting of the Organization for Human Brain Mapping, Beijing, China, June 2012.
  19. Joshi AA, Shattuck DW, Leahy RM (2012) Refinement of Automated Cortical Surface Registration and Labelling using Gradient Curvature Flow, to be presented at 18th Annual Meeting of the Organization for Human Brain Mapping, Beijing, China, June 2012.
  20. Klein A, Landman BA, Dal Canton T, Shattuck DW, Tourville JA, Worth AJ (2010) An interactive tool for constructing optimal brain colormaps 40th International Meeting of the Society for Neuroscience, San Diego, CA, Nov. 2010.
  21. Rosen B, Wedeen VJ, Van Horn JD, Fischl B, Buckner RL, Wald L, Hamalainen M, Stufflebeam S, Roffman J, Shattuck DW, Thompson PM, Woods RP, Freimer N, Bilder R & Toga AW (2010) The Human Connectome Project. 16th Annual Meeting of the Organization for Human Brain Mapping, Barcelona, Spain, June 2010
  22. Chiang MC, Barysheva M, Shattuck DW, Lee AD, Madsen SK, Avedissian S, Klunder A, Toga AW, McMahon KL, de Zubicaray GI, Wright MJ, Srivastava A, Balov N, Thompson PM (2009) Mapping Genetic Influences on Brain Fiber Architecture and Intellectual Performance -- A High Angulare Resolution diffusion Imaging (HARDI) Study, 15th Annual Meeting of the Organization for Human Brain Mapping, San Francisco, CA, June 2009.
  23. Pantazis D, Joshi AA, Jintao J, Shattuck DW, Bernstein LE, Damasio H, and Leahy RM (2009) Evaluating the accuracy of cortical registration using landmark-based and automatic methods, 15th Annual Meeting of the Organization for Human Brain Mapping, San Francisco, CA, June 2009.
  24. Hageman NS, Thompson PM, Shattuck DW, Avedissian C, Barysheva M, McMahon KL, de Zubicaray GI, Wright MJ, Toga AW (2009) Genetic Influence on White Matter Architecture in Twins: A Diffusion Tensor Imaging Study, the 15th Annual Meeting of the Organization for Human Brain Mapping, San Francisco, CA, June 2009.
  25. Tohka J, Dinov ID, Shattuck DW, and Toga A (2008) Brain MRI Segmentation Based on Local Markov Random Fields and Sub Volume Probabilistic Atlases, 13th Annual Meeting of the Organization for Human Brain Mapping, Melbourne, Australia, June 2008.
  26. Bilder R, Parker D, Brown N, Kalar D, Sabb F, Glahn D, Bearden CE, Poldrack R, Shattuck D, Cannon T, London E, Freimer N, Toga A (2007) Cognitive Phenomics: Web-based tools for hypothesis development in neuropsychiatry. 38th International Meeting of the Society for Neuroscience, San Diego, CA, Nov. 2007.
  27. Tohka J, Dinov ID, Shattuck DW, and Toga AW (2007) GAMIXTURE+MRFSEG: A flexible tool for voxel classification. In: Proc. of Nordic Neuroinformatics Workshop, Espoo, Finland, Oct. 2007, p. 10.
  28. Narr KL, Hageman N, Hamilton L, Gurbani M, Woods RP, Asarnow RF, Shattuck D, Toga AW, Nuechterlein KH (2007) Mean diffusivity: A biomarker for CSF-related disease and genetic liability effects in schizophrenia, 13th Annual Meeting of the Organization for Human Brain Mapping, Chicago, IL, June 2007.
  29. Bilder RM, Parker DS, Brown N, Kalar D, Sabb F, Glahn D, Bearden C, Poldrack R, Shattuck D, Cannon TD, London E, Freimer N, Toga A (2007) Cognitive Phenomics: Informatics Strategies for Schizophrenia Research 2007 International Congress on Schizophrenia Research, Colorado Springs, Colorado, March. 2007
  30. Bilder RM, Parker DS, Brown N, Kalar D, Sabb FW, Glahn D, Bearden C, Poldrack R, Shattuck D, Cannon TD, London E, Freimer N, Toga A (2007) Informatics Solutions for Neuropsychiatric Phenomics, Society of Biological Psychiatry, 62nd Annual Scientific Convention & Program, San Diego, CA, May 2007.
  31. Boline J, MacKenzie-Graham A, Shattuck D, Yuan H, Anderson S, Sforza D, Williams R, Wong W, Martone M, Zaslavsky I, Toga A (2006) A digital atlas and neuroinformatics framework for query and display of disparate data. 36th International Meeting of the Society for Neuroscience, Atlanta, GA.
  32. Shattuck DW, Hojatkashani C, Mirza M, Adisetiyo V, Salamon G, Narr KL, Poldrack RA, Bilder RM, and Toga AW (2006) Construction of a 3D Probabilistic Atlas of Human Brain Structures 12th Annual Meeting of the Organization for Human Brain Mapping, Florence, Italy, June 2006.
  33. Joshi AA, Shattuck DW, Thompson PM and Leahy RM (2006) Simultaneous Surface and Volume Registration using Harmonic Maps SIAM conference on Imaging Sciences, Minneapolis, May 2006.
  34. MacKenzie-Graham AJ, Tinsley M, Shah KP, Aguilar C, Strickland LV, Boline J, Martin M, Morales L, Shattuck DW, Jacobs RE, Voskuhl R, Toga AW (2006) Cerebellar Cortical Atrophy in C57BL/6J Mice with Experimental Autoimmune Encephalomyelitis American Academy of Neurology AAN 58th Annual Meeting, San Diego, CA, April 2006
  35. Sicotte NL, Giesser BS, Tandon V, Steiner B, Klutch R, Drain A, Shattuck DW, Hull L, Swerdloff R, Voskuhl RR (2006) A Pilot Study of Testosterone Treatment for Men with Relapsing Remitting Multiple Sclerosis American Academy of Neurology AAN 58th Annual Meeting, San Diego, CA, April 2006
  36. Looi JCL, Shattuck DW, Toga AW, Wen W, Brodaty H, Sachdev PS. (2006) Fully automated quantitative methods for mapping the 3-D distribution of white matter hyperintensities in the Sydney stroke study. Neurology 66(5), March 2006 Suppl 2: A109-A110.
  37. Looi JCL, Shattuck DW, Toga, AW, Wen W, Brodaty H, Sachdev PS (2005) Piloting a method for longitudinal quantitation of white matter hyperintensities in the Sydney Stroke Study, International Psychogeriatric Association 12th Congress, Stockholm, Sweden [platform presentation] International Psychogeriatrics 2005; 17 suppl 2: 158-159.
  38. Shattuck DW, Joshi A, Leahy RM, & Toga AW (2005) Automated Parameterized Cortical Surface Models from MRI, Brain Mapping June 2005, Toronto, CA.
  39. Joshi A, Shattuck DW Thompson PM & Leahy RM (2005) Thin Plate Spline Registration in the Intrinsic Geometry of the Cortical Surface, Human Brain Mapping June 2005, Toronto, CA
  40. Rex DE, Shattuck DW, Woods RP, Stoltzner SE & Toga AW (2003) Meta-algorithm for automated brain extraction from a structural MRI, 33rd International Meeting of the Society for Neuroscience, New Orleans, LA, November 8-12, 2003.
  41. Mackenzie-Graham A, Martin M, Jones E, Shattuck D, Jacobs R, Voskuhl R & Toga AW (2003) An atlas of experimental autoimmune encephalomyelitis in the C57BL/6 brain, 33rd International Meeting of the Society for Neuroscience, New Orleans, LA, November 8-12, 2003.
  42. Shattuck DW, Rex DE, Darvas F, Leahy RM & Toga AW (2003) JohnDoe: Anonymizing MRI data for the protection of research subject confidentiality. 9th International Conference on Functional Mapping of the Human Brain, June 19-22, 2003,New York, NY.
  43. Leahy RM, B. Bai, E. Asma, Q. Li, and Shattuck DW (2002) MAP Image Reconstruction Software for Concorde MicroPET Scanners, 2002 Annual Academy of Molecular Imaging Conference.
  44. Shattuck DW, Rapela J, Asma E, Chatzioannou A, Qi J & Leahy R (2001) Internet-Based 3D PET Image Reconstruction using A Beowulf PC Cluster in Proc. The Sixth International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, Asilomar, CA.
  45. Shattuck DW, Sutherling W & Leahy RM (2001) Improved Cortical MRI Segmentation of Brains with Intracranial Grid Electrodes, NeuroImage, 13(6):S244.
  46. Schaper KA, Arnold JB, Liow J-S, Stern JJ, Sled JG, Shattuck DW, Worth AJ, Cohen MS, Leahy RM, Mazziotta JC & Rottenberg DA (2001) Evaluation of Six Algorithms for Correcting Intensity Non-uniformity Effects in MRI Volumes, NeuroImage, 13(6):S237.
  47. Shattuck DW & Leahy RM (1999) Automated topologically correct cortical surfaces from MRI in Proceedings of the 21st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Atlanta.
  48. Zaini MR, Schaper KA, Anderson JR, Shattuck DW, Liow JS, Sled JG & Rottenberg DA (1999) Methods for evaluating the performance of MRI nonuniformity correction algorithms, NeuroImage, 9(6):S99.
  49. Rehm K, Shattuck DW, Leahy R, Schaper K & Rottenberg DA (1999) Semi-automated stripping of T1 MRI volumes: consensus of intensity-and edge-based methods, NeuroImage, 9(6):S86.
  50. Baillet S, Mosher JC, Leahy RM & Shattuck DW (1999) BrainStorm: A Matlab Toolbox for the Processing of MEG and EEG Signals, NeuroImage, 9(6):S246.